Dissertation
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Claudia Castillo-Moreno - Dissertation

Title: Protein structure prediction and design on near-term quantum computers

Overview

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  • Date:Starts 14 November 2025, 09:00Ends 14 November 2025, 12:00
  • Location:
    Kollektorn, Kemivägen 9, Chalmers.
  • Language:English

Opponent: Pasquale Scarlino, EPF, Switzerland

Abstract

I

Superconducting circuits are a powerful platform for studying and controlling the interaction between light and matter at the quantum level. In these systems, superconducting qubits act as artificial atoms (with matter-like degrees of freedom), whereas microwave resonators play the role of oscillators hosting photons (with photonic-like degrees of freedom). A major advantage of this platform is the ability to tailor the electromagnetic environment to which the qubits are coupled. This degree of control makes it possible to realize well-known quantum optics models, like the Jaynes-Cummings model, as well as more complex systems, like quantum electrodynamics close to a bandgap.

In this thesis, we engineer structured electromagnetic environments and couple superconducting qubits to them to experimentally study their interaction. By coupling multiple microwave resonators together, we create a metamaterial. When an atom interacts with the metamaterial, an atom-photon bound state emerges. We observe the dynamics of the creation and dissolution of the atom-photon bound state, as well as the spectral content of its photonic component, for the first time to our knowledge.
Our metamaterial is intrinsically nonlinear because each resonator is formed by an array of Josephson junctions to serve as an inductor. When the system is pumped, its phase diagram exhibits multimode dissipative phase transitions with timescales on the order of hundred seconds. There is ongoing theoretical debate about whether such phase transitions can occur in one-dimensional systems, a question we address and resolve in this work.

Furthermore, we engineer qubit decay using two different approaches. In the first one, we engineer the decay of two coupled atoms to two waveguides by using a symmetric–antisymmetric coupling configuration. This approach enables selective coupling to bright and dark states of the system. In the second one, we suppress the Purcell decay of a qubit using a compact lumped-element Purcell filter. In addition, we characterize the Purcell decay by employing an auxiliary superconducting qubit as a sensitive power detector directly coupled to the feedline waveguide used for the qubit readout.

In summary, this thesis presents three different methods for controlling light–matter interactions in structured quantum systems, including decay suppression with both Purcell filters and symmetry-selective couplings. The thesis also introduces new experimental techniques for probing atom-photon bound states and provides direct evidence of collective phenomena in driven-dissipative quantum metamaterials.

Claudia Castillo-Moreno - Dissertation | Chalmers