The conference will run from 14:00 on Wednesday 25 August until around 12:30 on Friday 27 August.

Programme (updated 17 August 2010)

Keynote Speakers

• Juliana Freire
• Joel Saltz

Accepted Papers

• Michael Hartung, Anika Groß, Toralf Kirsten and Erhard Rahm. Discovering Evolving Regions in Life Science Ontologies
• Anika Groß, Michael Hartung, Toralf Kirsten and Erhard Rahm. On Matching Large Life Science Ontologies in Parallel
• Qiang Liu and Patrick Lambrix. A system for debugging missing is-a structure in networked ontologies
• Andrew Simpson, Mark Slaymaker and David Gavaghan. On the secure sharing and aggregation of data to support Systems Biology research
• Paul Gordon, Ken Barker and Christoph Sensen. Helping Molecular Biologists Effectively Build Workflows, Without Programming
• Kamar Marrakchi, Abdelaali Briache, Amine Kerzazi, Ismael Navas-Delgado, José Francisco Aldana Montes, Mohamed Ettayebi, Khalid Lairini and Badr Din Rossi Hassani. A data warehouse approach to semantic integration of Pseudomonas data
• Ithipol Suriyawongkul, Christopher Southan and Sorel Muresan. The Cinderella of Biological Data Integration: Addressing some of the Challenges of Entity and Relationship Mining from Patent Sources.
• Jonas Bergman Laurila, Rajaraman Kanagasabai and Christopher Baker. Algorithm for Grounding Mutation Mentions from Text to Protein Sequences
• Fabrizio Smeraldi, Michael Defoin-Platel and Mansoor Saqi. Handling missing features with boosting algorithms for protein-protein interaction prediction
• Tantan Liu, Fan Wang and Gagan Agrawal. Instance Discovery and Schema Matching With Applications to Biological Deep Web Data Integration
• Neil Swainston, Daniel Jameson, Peter Li, Irena Spasic, Pedro Mendes and Norman Paton. Integrative Information Management for Systems Biology
• Hector Rovira, Sarah Killcoyne, Ilya Shmulevich and John Boyle. An integration architecture designed to deal with the issues of biological scope, scale and complexity. (slides)
• Lorena Etcheverry, Shahan Khatchadourian and Mariano Consens. Quality Assessment of MAGE-ML Genomic Datasets Using DescribeX
• Marco Masseroli, Norman W Paton and Giorgio Ghisalberti. Search Computing: Integrating Ranked Data in the Life Sciences